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    paqr5a progestin and adipoQ receptor family member Va [ Danio rerio (zebrafish) ]

    Gene ID: 393156, updated on 9-Dec-2024

    Summary

    Official Symbol
    paqr5aprovided by ZNC
    Official Full Name
    progestin and adipoQ receptor family member Vaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-867
    See related
    Ensembl:ENSDARG00000041145 AllianceGenome:ZFIN:ZDB-GENE-040426-867
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    paqr5; zgc:56016
    Summary
    Predicted to enable signaling receptor activity. Predicted to act upstream of or within oogenesis. Predicted to be located in membrane. Is expressed in hindbrain; olfactory placode; ovarian follicle stage IV; and peripheral olfactory organ. Orthologous to human PAQR5 (progestin and adipoQ receptor family member 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See paqr5a in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (20459888..20466061, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (20470822..20476995, complement)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene TLE family member 3, transcriptional corepressor a Neighboring gene kinesin family member 23 Neighboring gene protein FAM180A Neighboring gene damage-specific DNA binding protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC56016

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables steroid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within oogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    membrane progestin receptor gamma-A
    Names
    mPR gamma-A
    progestin and adipoQ receptor family member V-A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200187.1NP_956481.1  membrane progestin receptor gamma-A

      See identical proteins and their annotated locations for NP_956481.1

      Status: PROVISIONAL

      Source sequence(s)
      BC045864
      UniProtKB/Swiss-Prot
      Q1LUF6, Q7ZVH1
      Related
      ENSDARP00000060310.4, ENSDART00000060311.5
      Conserved Domains (1) summary
      pfam03006
      Location:44286
      HlyIII; Haemolysin-III related

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      20459888..20466061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395022.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      53433..59606 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)