ubxn6 UBX domain protein 6 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ubxn6provided by ZNC
Official Full Name: UBX domain protein 6provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-5680
See related: Ensembl:ENSDARG00000003087 AllianceGenome:ZFIN:ZDB-GENE-030131-5680
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: ubxd1; zgc:66492; wu:fi13b03
Summary: Predicted to be active in cytoplasm. Orthologous to human UBXN6 (UBX domain protein 6). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 22

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	22	NC_007133.7 (22260210..22274393)
105	previous assembly	GRCz10 (GCF_000002035.5)	22	NC_007133.6 (22235232..22249415)

Chromosome 22 - NC_007133.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: UBX domain-containing protein 6

Names: UBX domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001044780.1 → NP_001038245.1 UBX domain-containing protein 6

Status: PROVISIONAL

Source sequence(s)

BX005201

UniProtKB/TrEMBL

A0A8M1N9A8, Q1LYI0

Related

ENSDARP00000010246.3, ENSDART00000017755.4

Conserved Domains (2) summary

cd10460
Location:154 → 256

PUB_UBXD1; PNGase/UBA or UBX (PUB) domain of UBXD1

cl00155
Location:330 → 403

UBQ; Ubiquitin-like proteins