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    si:dkey-73n10.1 si:dkey-73n10.1 [ Danio rerio (zebrafish) ]

    Gene ID: 558609, updated on 9-Dec-2024

    Summary

    Official Symbol
    si:dkey-73n10.1provided by ZNC
    Official Full Name
    si:dkey-73n10.1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-9311
    See related
    Ensembl:ENSDARG00000069168 AllianceGenome:ZFIN:ZDB-GENE-030131-9311
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fj65a11; wu:fj65a11
    Summary
    Orthologous to human C15orf39 (chromosome 15 open reading frame 39). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See si:dkey-73n10.1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (18931484..18942110, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (18942294..18953073, complement)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110438119 Neighboring gene ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) Neighboring gene phosphopantothenoylcysteine decarboxylase Neighboring gene 3-hydroxyacyl-CoA dehydratase 3 Neighboring gene integrator complex subunit 14

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    si:dkey-73n10.1; uncharacterized protein C15orf39 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      18931484..18942110 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021467796.2XP_021323471.1  uncharacterized protein C15orf39 homolog isoform X1

      UniProtKB/TrEMBL
      A0A8M1RMQ0, A0A8M9PMH8, F1QGJ6
      Related
      ENSDARP00000091231.4, ENSDART00000100458.5
    2. XM_021467795.2XP_021323470.1  uncharacterized protein C15orf39 homolog isoform X2

      UniProtKB/TrEMBL
      A0A8M1RMQ0, A0A8M9PQR5

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395020.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      213453..223787 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005159151.5XP_005159208.2  uncharacterized protein C15orf39 homolog isoform X1

      UniProtKB/TrEMBL
      A0A8M1RMQ0, A0A8M2B623
    2. XM_021473272.2XP_021328947.1  uncharacterized protein C15orf39 homolog isoform X3

      UniProtKB/TrEMBL
      A0A8M1RMQ0, A0A8M9PD12
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