nutf2l nuclear transport factor 2, like [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: nutf2lprovided by ZNC
Official Full Name: nuclear transport factor 2, likeprovided by ZNC
Primary source: ZFIN:ZDB-GENE-020416-1
See related: Ensembl:ENSDARG00000014499 AllianceGenome:ZFIN:ZDB-GENE-020416-1
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cb177; nutf2; wu:fb07g06; zgc:101013
Summary: Predicted to enable nuclear import signal receptor activity. Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within nucleocytoplasmic transport and protein transport. Predicted to be located in cytoplasm and nucleus. Predicted to be part of nuclear pore central transport channel. Is expressed in several structures, including blood; immature eye; nervous system; neural tube; and pharyngeal arch 3-7 skeleton. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 19

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (20778018..20783770)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (21193695..21199447)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

fb07g06.x1 (e-PCR)
- UniSTS:202741

fb07f06.x1 (e-PCR)
- UniSTS:189945

fb07f06.x1 (e-PCR)
- UniSTS:189946

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables nuclear import signal receptor activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in mRNA transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within nucleocytoplasmic transport	IEA Inferred from Electronic Annotation more info
involved_in protein import into nucleus	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
part_of nuclear pore central transport channel	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: nuclear transport factor 2, like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001003598.2 → NP_001003598.1 nuclear transport factor 2, like

See identical proteins and their annotated locations for NP_001003598.1

Status: VALIDATED

Source sequence(s)

EH475711, EH518961, EH538050

UniProtKB/TrEMBL

A0A8M1N1M1, Q6DC81

Related

ENSDARP00000017328.6, ENSDART00000024208.7

Conserved Domains (1) summary

cd00780
Location:7 → 122

NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...