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    si:dkey-193p11.2 si:dkey-193p11.2 [ Danio rerio (zebrafish) ]

    Gene ID: 100002805, updated on 12-Sep-2024

    Summary

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    Official Symbol
    si:dkey-193p11.2provided by ZNC
    Official Full Name
    si:dkey-193p11.2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-8407
    See related
    Ensembl:ENSDARG00000096712 AllianceGenome:ZFIN:ZDB-GENE-030131-8407
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb11c03; wu:fb11c03
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    Genomic context

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    See si:dkey-193p11.2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (25885659..25887891, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (25794299..25796531, complement)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene endothelial PAS domain protein 1a Neighboring gene glutamate dehydrogenase 1b Neighboring gene synuclein, gamma b (breast cancer-specific protein 1) Neighboring gene multimerin 2b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_137276.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CU459179, EH448421, EH583418
      Related
      ENSDART00000152983.2

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      25885659..25887891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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