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    zgc:158345 zgc:158345 [ Danio rerio (zebrafish) ]

    Gene ID: 100009644, updated on 12-Sep-2024

    Summary

    Official Symbol
    zgc:158345provided by ZNC
    Official Full Name
    zgc:158345provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070209-268
    See related
    AllianceGenome:ZFIN:ZDB-GENE-070209-268
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

    See zgc:158345 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (34337..44733, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (34342..44755, complement)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene dynamin 3b Neighboring gene zinc finger-like gene 2b Neighboring gene tensin-3-like Neighboring gene tensin-3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    tensin-3; uncharacterized protein LOC100009644

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      34337..44733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068213326.1XP_068069427.1  tensin-3

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001083013.1: Suppressed sequence

      Description
      NM_001083013.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from rat: Tns3 (GeneID:360980).