slc25a33 solute carrier family 25 member 33 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: slc25a33provided by ZNC
Official Full Name: solute carrier family 25 member 33provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-2183
See related: Ensembl:ENSDARG00000039931 AllianceGenome:ZFIN:ZDB-GENE-040426-2183
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:65787; zgc:77728; wu:fe01d11
Summary: Predicted to enable pyrimidine nucleotide transmembrane transporter activity. Predicted to be involved in mitochondrial genome maintenance and pyrimidine nucleotide import into mitochondrion. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Is expressed in margin; myotome; and pharyngeal arch 3-7 skeleton. Orthologous to human SLC25A33 (solute carrier family 25 member 33). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	23	NC_007134.7 (29861243..29878643, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	23	NC_007134.6 (29934702..29952102, complement)

Chromosome 23 - NC_007134.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

z4075 (e-PCR), detects polymorphism
- UniSTS:204835

fb10h03.y1 (e-PCR)
- UniSTS:190013

fe01d11.x1 (e-PCR)
- UniSTS:195907

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables pyrimidine nucleotide transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info
enables pyrimidine nucleotide transmembrane transporter activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in mitochondrial genome maintenance	IBA Inferred from Biological aspect of Ancestor more info
involved_in pyrimidine nucleotide import into mitochondrion	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: solute carrier family 25 member 33

Names: mitochondrial carrier protein; solute carrier family 25 (pyrimidine nucleotide carrier), member 33

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_213157.1 → NP_998322.1 solute carrier family 25 member 33

See identical proteins and their annotated locations for NP_998322.1

Status: PROVISIONAL

Source sequence(s)

BC056716

UniProtKB/Swiss-Prot

Q6P036

Related

ENSDARP00000058406.5, ENSDART00000058407.6

Conserved Domains (2) summary

PTZ00169
Location:4 → 309

PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

pfam00153
Location:6 → 116

Mito_carr; Mitochondrial carrier protein