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    med11 mediator complex subunit 11 [ Danio rerio (zebrafish) ]

    Gene ID: 100148504, updated on 9-Dec-2024

    Summary

    Official Symbol
    med11provided by ZNC
    Official Full Name
    mediator complex subunit 11provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-091207-2
    See related
    AllianceGenome:ZFIN:ZDB-GENE-091207-2
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable transcription coregulator activity. Predicted to act upstream of or within regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Orthologous to human MED11 (mediator complex subunit 11). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See med11 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (22912251..22916111)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (22942799..22946659)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 4 subunit mu 1 Neighboring gene arrestin, beta 2a Neighboring gene si:ch1073-143l10.2 Neighboring gene zgc:103508 Neighboring gene ribonuclease, RNase K b

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of mediator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mediator complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    mediator of RNA polymerase II transcription subunit 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001160035.1NP_001153507.1  mediator of RNA polymerase II transcription subunit 11

      See identical proteins and their annotated locations for NP_001153507.1

      Status: PROVISIONAL

      Source sequence(s)
      BC133894, EH481587, EH544592
      UniProtKB/Swiss-Prot
      A3KNK7
      Conserved Domains (1) summary
      pfam10280
      Location:3110
      Med11; Mediator complex protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      22912251..22916111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009305268.4XP_009303543.2  mediator of RNA polymerase II transcription subunit 11 isoform X1