U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC560947 putative mediator of RNA polymerase II transcription subunit 26 [ Danio rerio (zebrafish) ]

    Gene ID: 560947, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC560947
    Gene description
    putative mediator of RNA polymerase II transcription subunit 26
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC560947 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (7551838..7557850)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (7522614..7528531)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene actin related protein 3B Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 2 Neighboring gene lysine (K)-specific methyltransferase 2Ca Neighboring gene UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) Neighboring gene ATPase H+ transporting V0 subunit a1b

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    involucrin; putative mediator of RNA polymerase II transcription subunit 26

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      7551838..7557850
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068217151.1 → XP_068073252.1  putative mediator of RNA polymerase II transcription subunit 26 isoform X4

      UniProtKB/TrEMBL
      A0A8M3AVW7

    2. XM_005162550.5 → XP_005162607.1  putative mediator of RNA polymerase II transcription subunit 26 isoform X3

      UniProtKB/TrEMBL
      A0A8M2B9K5, A0A8M3AVW7, A0A8M3B6J4
      Conserved Domains (1) summary
      TIGR03835
      Location:45 → 288
      termin_org_DnaJ; terminal organelle assembly protein TopJ

    3. XM_068217152.1 → XP_068073253.1  involucrin isoform X5

      UniProtKB/TrEMBL
      A0A8M3B6J4

    4. XM_068217150.1 → XP_068073251.1  putative mediator of RNA polymerase II transcription subunit 26 isoform X2

      UniProtKB/TrEMBL
      A0A8M3B6J4

    5. XM_009297273.4 → XP_009295548.1  putative mediator of RNA polymerase II transcription subunit 26 isoform X1

      UniProtKB/TrEMBL
      A0A8M3AP38, A0A8M3B6J4
      Conserved Domains (1) summary
      PRK14950
      Location:15 → 213
      PRK14950; DNA polymerase III subunits gamma and tau; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.