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    bivm basic, immunoglobulin-like variable motif containing [ Danio rerio (zebrafish) ]

    Gene ID: 555455, updated on 9-Dec-2024

    Summary

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    Official Symbol
    bivmprovided by ZNC
    Official Full Name
    basic, immunoglobulin-like variable motif containingprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-010822-3
    See related
    Ensembl:ENSDARG00000061409 AllianceGenome:ZFIN:ZDB-GENE-010822-3
    Gene type
    other
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Orthologous to human BIVM (basic, immunoglobulin-like variable motif containing). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See bivm in Genome Data Viewer
    Location:
    chromosome: 6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (29294029..29305166, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (29304006..29314589, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene ATPase Na+/K+ transporting subunit beta 1a Neighboring gene NME/NM23 family member 7 Neighboring gene zgc:172121 Neighboring gene si:ch211-201h21.5 Neighboring gene transmembrane protein 131

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BIVM, a novel gene widely distributed among deuterostomes, shares a core sequence with an unusual gene in Giardia lamblia. Yoder JA, et al. Genomics, 2002 Jun. PMID 12036287
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      29294029..29305166 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394647.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      14187..25245 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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