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    cbln11 cerebellin 11 [ Danio rerio (zebrafish) ]

    Gene ID: 100149559, updated on 12-Sep-2024

    Summary

    Official Symbol
    cbln11provided by ZNC
    Official Full Name
    cerebellin 11provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-111110-2
    See related
    Ensembl:ENSDARG00000086654 AllianceGenome:ZFIN:ZDB-GENE-111110-2
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
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    Genomic context

    See cbln11 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (4291710..4296700, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (4153684..4158674, complement)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108190601 Neighboring gene kelch-like protein 33 Neighboring gene si:ch211-63p21.8 Neighboring gene solute carrier family 12 member 10, tandem duplicate 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    cerebellin 11
    Names
    sghC1q11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001293704.1NP_001280633.1  cerebellin 11 precursor

      Status: VALIDATED

      Source sequence(s)
      EH488720, EH494747
      UniProtKB/TrEMBL
      A0A8M1P6T4, E7F5I8
      Related
      ENSDARP00000107225.1, ENSDART00000128855.4
      Conserved Domains (1) summary
      pfam00386
      Location:75205
      C1q; C1q domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      4291710..4296700 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)