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    fam117bb family with sequence similarity 117 member Bb [ Danio rerio (zebrafish) ]

    Gene ID: 100003476, updated on 9-Dec-2024

    Summary

    Official Symbol
    fam117bbprovided by ZNC
    Official Full Name
    family with sequence similarity 117 member Bbprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070912-554
    See related
    Ensembl:ENSDARG00000009839 AllianceGenome:ZFIN:ZDB-GENE-070912-554
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-56k23.2
    Summary
    Orthologous to human FAM117B (family with sequence similarity 117 member B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See fam117bb in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (13120419..13217015)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (13149382..13241546)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene si:dkey-230p4.1 Neighboring gene bone morphogenetic protein receptor, type II b (serine/threonine kinase) Neighboring gene uncharacterized LOC103911618 Neighboring gene KIAA2012 ortholog Neighboring gene calcium responsive transcription factor

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001128362.1NP_001121834.1  protein FAM117B

      Status: PROVISIONAL

      Source sequence(s)
      CR759872, CR759883
      UniProtKB/TrEMBL
      A0A8M1NJZ5, B0V0F6
      Related
      ENSDARP00000113461.1, ENSDART00000141005.2
      Conserved Domains (1) summary
      pfam15388
      Location:229538
      FAM117; Protein Family FAM117

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      13120419..13217015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068223260.1XP_068079361.1  protein FAM117B isoform X1