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    slc2a11l solute carrier family 2 member 11, like [ Danio rerio (zebrafish) ]

    Gene ID: 564849, updated on 9-Dec-2024

    Summary

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    Official Symbol
    slc2a11lprovided by ZNC
    Official Full Name
    solute carrier family 2 member 11, likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-061215-118
    See related
    Ensembl:ENSDARG00000062873 AllianceGenome:ZFIN:ZDB-GENE-061215-118
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:158393
    Summary
    Predicted to enable hexose transmembrane transporter activity. Predicted to be involved in monosaccharide transmembrane transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in central nervous system; heart; integument; kidney; and muscle. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See slc2a11l in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (17485945..17501505, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (17528511..17544071, complement)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene microRNA 301c Neighboring gene uncharacterized LOC137496576 Neighboring gene 5'-nucleotidase, cytosolic II, like 1 Neighboring gene uncharacterized LOC795962 Neighboring gene solute carrier family 2, facilitated glucose transporter member 11-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Functional visualization and disruption of targeted genes using CRISPR/Cas9-mediated eGFP reporter integration in zebrafish. Ota S, et al. Sci Rep, 2016 Oct 11. PMID 27725766, Free PMC Article
    2. Specific expression and regulation of glucose transporters in zebrafish ionocytes. Tseng YC, et al. Am J Physiol Regul Integr Comp Physiol, 2009 Aug. PMID 19458281
    3. Loss of glyoxalase 2 alters the glucose metabolism in zebrafish. Tabler CT, et al. Redox Biol, 2023 Feb. PMID 36535130, Free PMC Article
    4. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables D-glucose transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in D-glucose import IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in dehydroascorbic acid transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    solute carrier family 2 member 11, like
    Names
    solute carrier family 2 (facilitated glucose transporter), member 11-like
    zglut11c

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080016.1 → NP_001073485.1  solute carrier family 2 member 11, like

      See identical proteins and their annotated locations for NP_001073485.1

      Status: PROVISIONAL

      Source sequence(s)
      BC128857
      UniProtKB/TrEMBL
      A1A5Y3
      Related
      ENSDARP00000115161.1, ENSDART00000144847.3
      Conserved Domains (2) summary
      cd06174
      Location:69 → 200
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam00083
      Location:19 → 473
      Sugar_tr; Sugar (and other) transporter

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      17485945..17501505 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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