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    ubiquitin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819822, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ubiquitin family protein
    Primary source
    TAIR:AT3G06455
    Locus tag
    AT3G06455
    See related
    Araport:AT3G06455
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24P17.5
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (1980542..1982162)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Galactosyltransferase family protein Neighboring gene HCO3- transporter family Neighboring gene GNS1/SUR4 membrane protein family Neighboring gene GNS1/SUR4 membrane protein family Neighboring gene DEAD box RNA helicase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_180192.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ubiquitin family protein
    NP_850523.2
    • ubiquitin family protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G01000.1); Has 8324 Blast hits to 4012 proteins in 617 species: Archae - 0; Bacteria - 0; Metazoa - 3789; Fungi - 883; Plants - 2106; Viruses - 164; Other Eukaryotes - 1382 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1980542..1982162
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180192.2 → NP_850523.2  ubiquitin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850523.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X9N7, A0A654F634, F4JAX0
      Conserved Domains (2) summary
      pfam13297
      Location:285 → 332
      Telomere_Sde2_2; Telomere stability C-terminal
      cl00155
      Location:9 → 75
      UBQ; Ubiquitin-like proteins
    Nucleotide Protein
    Heading Accession and Version

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