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    SecY protein transport family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844208, updated on 18-Sep-2024

    Summary

    Official Full Name
    SecY protein transport family protein
    Primary source
    TAIR:AT1G78720
    Locus tag
    AT1G78720
    See related
    Araport:AT1G78720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9K20.24; F9K20_24
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (29605457..29607678)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Phospholipid/glycerol acyltransferase family protein Neighboring gene BES1/BZR1 homolog 4 Neighboring gene TRICHOME BIREFRINGENCE-LIKE 42 Neighboring gene FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein Neighboring gene RNI-like superfamily protein

    Interactions

    General gene information

    NM_001334841.1
    NM_001334842.1

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast  
    located_in endoplasmic reticulum PubMed 

    General protein information

    Preferred Names
    SecY protein transport family protein
    NP_001319405.1
    • SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.10 ten leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G34250.2); Has 4820 Blast hits to 4813 proteins in 2037 species: Archae - 276; Bacteria - 3174; Metazoa - 262; Fungi - 229; Plants - 171; Viruses - 0; Other Eukaryotes - 708 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29605457..29607678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106519.2NP_177993.1  SecY protein transport family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177993.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W485, A0A654EQ54, Q9ZV90
      Conserved Domains (1) summary
      PTZ00219
      Location:1473
      PTZ00219; Sec61 alpha subunit; Provisional
    2. NM_001334841.1NP_001319405.1  SecY protein transport family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W485, A0A654EQ54, Q9ZV90
      Conserved Domains (1) summary
      PTZ00219
      Location:1473
      PTZ00219; Sec61 alpha subunit; Provisional
    3. NM_001334842.1NP_001320491.1  SecY protein transport family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W485, A0A1P8AMZ3
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