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    PRA1.G1 prenylated RAB acceptor 1.G1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842013, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PRA1.G1
    Official Full Name
    prenylated RAB acceptor 1.G1
    Primary source
    TAIR:AT1G55640
    Locus tag
    AT1G55640
    See related
    Araport:AT1G55640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20N2.7; prenylated RAB acceptor 1.G1
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    Genomic context

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    See PRA1.G1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (20793720..20794577)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene tRNA-Ser Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein Neighboring gene ncRNA Neighboring gene FBD, F-box and Leucine Rich Repeat domains containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The PRA1 gene family in Arabidopsis. Alvim Kamei CL, et al. Plant Physiol, 2008 Aug. PMID 18583532, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within vesicle-mediated transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prenylated RAB acceptor 1.G1
    NP_175960.1
    • prenylated RAB acceptor 1.G1 (PRA1.G1); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.G2 (TAIR:AT5G56230.1); Has 359 Blast hits to 359 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 19; Plants - 293; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20793720..20794577
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104440.2 → NP_175960.1  prenylated RAB acceptor 1.G1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175960.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZWD1
      UniProtKB/TrEMBL
      A0A178WJW9, A0A5S9WQ80, A0A654EK68
      Conserved Domains (1) summary
      pfam03208
      Location:33 → 172
      PRA1; PRA1 family protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZWD1.1

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