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    ZYP1a Myosin heavy chain-related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838831, updated on 18-Sep-2024

    Summary

    Official Symbol
    ZYP1a
    Official Full Name
    Myosin heavy chain-related protein
    Primary source
    TAIR:AT1G22260
    Locus tag
    AT1G22260
    See related
    Araport:AT1G22260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtZYP1a; T16E15.12; T16E15_12; ZYP1
    Summary
    One of two nearly identical proteins (ZYP1b) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.
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    Genomic context

    See ZYP1a in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    19
    Sequence:
    Chromosome: 1; NC_003070.9 (7859630..7865263, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pumilio 8 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Trm112p-like protein Neighboring gene Myosin heavy chain-related protein

    Bibliography

    General gene information

    NM_001332543.1
    NM_001332544.1
    NM_102076.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular adaptor activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
     
    located_in nucleus HDA PubMed 
    located_in synaptonemal complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Myosin heavy chain-related protein
    NP_173645.3
    • ZYP1a; BEST Arabidopsis thaliana protein match is: Myosin heavy chain-related protein (TAIR:AT1G22275.1); Has 173955 Blast hits to 88084 proteins in 3391 species: Archae - 2245; Bacteria - 35093; Metazoa - 72717; Fungi - 13338; Plants - 8123; Viruses - 835; Other Eukaryotes - 41604 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7859630..7865263 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102076.4NP_173645.3  Myosin heavy chain-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173645.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4TWG2, Q9LME2
      UniProtKB/TrEMBL
      A0A5S9VKH7, A0A654EC89, A0A7G2DYN7
      Conserved Domains (1) summary
      TIGR02168
      Location:51696
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    2. NM_001332543.1NP_001321722.1  Myosin heavy chain-related protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARS4, A0A7G2DYN7
    3. NM_001332544.1NP_001321723.1  Myosin heavy chain-related protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W927, A0A1P8ARU6