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    cytochrome b6f complex subunit (petM) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817191, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cytochrome b6f complex subunit (petM)
    Primary source
    TAIR:AT2G26500
    Locus tag
    AT2G26500
    See related
    Araport:AT2G26500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J22.17; T9J22_17
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (11270082..11271074)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene UDP-glucosyl transferase 76D1 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene Xanthine/uracil permease family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PetM Is Essential for the Stabilization and Function of the Cytochrome b6f Complex in Arabidopsis. Lan Y, et al. Plant Cell Physiol, 2021 Dec 3. PMID 34283246
    2. A Single Xyloglucan Xylosyltransferase Is Sufficient for Generation of the XXXG Xylosylation Pattern of Xyloglucan. Zhong R, et al. Plant Cell Physiol, 2021 Dec 3. PMID 34264339
    3. The pgr1 mutation in the Rieske subunit of the cytochrome b6f complex does not affect PGR5-dependent cyclic electron transport around photosystem I. Okegawa Y, et al. J Biol Chem, 2005 Aug 5. PMID 15951430
    4. A split-ubiquitin yeast two-hybrid screen to examine the substrate specificity of atToc159 and atToc132, two Arabidopsis chloroplast preprotein import receptors. Dutta S, et al. PLoS One, 2014. PMID 24736607, Free PMC Article
    5. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Peltier JB, et al. J Biol Chem, 2004 Nov 19. PMID 15322131

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PetM Is Essential for the Stabilization and Function of the Cytochrome b6f Complex in Arabidopsis.
      Title: PetM Is Essential for the Stabilization and Function of the Cytochrome b6f Complex in Arabidopsis.
    2. A Single Xyloglucan Xylosyltransferase Is Sufficient for Generation of the XXXG Xylosylation Pattern of Xyloglucan.
      Title: A Single Xyloglucan Xylosyltransferase Is Sufficient for Generation of the XXXG Xylosylation Pattern of Xyloglucan.
    3. To assess whether ferredoxin donates electrons directly to plastoquinone or via a Q-cycle in the cytochrome b(6)f complex in PSI cyclic electron transport, we characterized the activity of photosystem I cyclic electron transport in an Arabidopsis mutant.
      Title: The pgr1 mutation in the Rieske subunit of the cytochrome b6f complex does not affect PGR5-dependent cyclic electron transport around photosystem I.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084495.2
    NM_128207.6
    NM_179748.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast thylakoid membrane HDA PubMed 
    part_of cytochrome b6f complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in peroxisome HDA PubMed 

    General protein information

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    Preferred Names
    cytochrome b6f complex subunit (petM)
    NP_001077964.1
    • cytochrome b6f complex subunit (petM), putative; Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_565623.1
    • cytochrome b6f complex subunit (petM), putative; FUNCTIONS IN: plastoquinol-plastocyanin reductase activity; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PetM of cytochrome b6/f complex subunit 7 (InterPro:IPR012595); Has 54 Blast hits to 54 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_850079.1
    • cytochrome b6f complex subunit (petM), putative; FUNCTIONS IN: plastoquinol-plastocyanin reductase activity; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PetM of cytochrome b6/f complex subunit 7 (InterPro:IPR012595); Has 54 Blast hits to 54 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11270082..11271074
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128207.6 → NP_565623.1  cytochrome b6f complex subunit (petM) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565623.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXY8, O48717
      Conserved Domains (1) summary
      pfam08041
      Location:90 → 118
      PetM; PetM family of cytochrome b6f complex subunit 7

    2. NM_001084495.2 → NP_001077964.1  cytochrome b6f complex subunit (petM) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077964.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MQ99

    3. NM_179748.3 → NP_850079.1  cytochrome b6f complex subunit (petM) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850079.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXY8, O48717
      Conserved Domains (1) summary
      pfam08041
      Location:90 → 118
      PetM; PetM family of cytochrome b6f complex subunit 7
    Nucleotide Protein
    Heading Accession and Version

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