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    Ribosomal protein L1p/L10e family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818865, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein L1p/L10e family
    Primary source
    TAIR:AT2G42650
    Locus tag
    AT2G42650
    See related
    Araport:AT2G42650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14N22.8; F14N22_8
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (17765178..17766888)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RNI-like superfamily protein Neighboring gene Mitogen activated protein kinase kinase kinase-like protein Neighboring gene Homeodomain-like superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_129826.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ribosomal protein L1p/L10e family
    NP_181793.1
    • Ribosomal protein L1p/L10e family; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT3G58660.1); Has 1164 Blast hits to 1162 proteins in 304 species: Archae - 34; Bacteria - 0; Metazoa - 441; Fungi - 309; Plants - 224; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17765178..17766888
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129826.5 → NP_181793.1  Ribosomal protein L1p/L10e family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181793.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXM8, A0A5S9X6F2, Q8L8B2, Q8RY41, Q8S8D2
      Conserved Domains (1) summary
      pfam00687
      Location:33 → 233
      Ribosomal_L1; Ribosomal protein L1p/L10e family
    Nucleotide Protein
    Heading Accession and Version

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