U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    BGLU44 B-S glucosidase 44 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821333, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    BGLU44
    Official Full Name
    B-S glucosidase 44
    Primary source
    TAIR:AT3G18080
    Locus tag
    AT3G18080
    See related
    Araport:AT3G18080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    B-S glucosidase 44
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BGLU44 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (6191461..6194452)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene beta glucosidase 43 Neighboring gene ncRNA Neighboring gene nuclear RNA polymerase D2B Neighboring gene myb domain protein 4r1 Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1. Xu Z, et al. Plant Mol Biol, 2004 May. PMID 15604686
    2. Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. Boudart G, et al. Proteomics, 2005 Jan. PMID 15593128
    3. High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Giavalisco P, et al. Plant Mol Biol, 2005 Mar. PMID 15821981
    4. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Bayer EM, et al. Proteomics, 2006 Jan. PMID 16287169
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_112690.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables amygdalin beta-glucosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables beta-gentiobiose beta-glucosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables beta-glucosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables beta-mannosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables cellobiose glucosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables esculin beta-glucosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosolic ribosome HDA PubMed 
    located_in plant-type cell wall HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    B-S glucosidase 44
    NP_188436.1
    • B-S glucosidase 44 (BGLU44); FUNCTIONS IN: in 6 functions; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosolic ribosome, cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 43 (TAIR:AT3G18070.1); Has 11220 Blast hits to 10898 proteins in 1459 species: Archae - 142; Bacteria - 7700; Metazoa - 714; Fungi - 202; Plants - 1462; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6191461..6194452
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112690.4 → NP_188436.1  B-S glucosidase 44 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188436.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LV33
      UniProtKB/TrEMBL
      A0A5S9XDF8, A0A654FHE8
      Conserved Domains (1) summary
      cl23725
      Location:40 → 510
      Glyco_hydro_1; Glycosyl hydrolase family 1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LV33.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools