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    myosin-4 protein (DUF641) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819134, updated on 18-Sep-2024

    Summary

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    Official Full Name
    myosin-4 protein (DUF641)
    Primary source
    TAIR:AT2G45260
    Locus tag
    AT2G45260
    See related
    Araport:AT2G45260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4L23.23
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (18664390..18666475, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene integral membrane hemolysin-III-like protein Neighboring gene miscRNA Neighboring gene glycoprotease 1 Neighboring gene RAS associated with diabetes protein 51C Neighboring gene Transketolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. COST1 regulates autophagy to control plant drought tolerance. Bao Y, et al. Proc Natl Acad Sci U S A, 2020 Mar 31. PMID 32170020, Free PMC Article
    2. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_130089.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative gravitropism IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within negative regulation of autophagy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to red or far red light IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in autophagosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    myosin-4 protein (DUF641)
    NP_182051.1
    • Plant protein of unknown function (DUF641); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT4G34080.1); Has 407 Blast hits to 396 proteins in 44 species: Archae - 0; Bacteria - 10; Metazoa - 42; Fungi - 9; Plants - 286; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18664390..18666475 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130089.4 → NP_182051.1  myosin-4 protein (DUF641) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182051.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VT59, O22146
      Conserved Domains (1) summary
      pfam04859
      Location:31 → 158
      DUF641; Plant protein of unknown function (DUF641)
    Nucleotide Protein
    Heading Accession and Version

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