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    ARFC1 ADP-ribosylation factor C1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821868, updated on 18-Sep-2024

    Summary

    Official Symbol
    ARFC1
    Official Full Name
    ADP-ribosylation factor C1
    Primary source
    TAIR:AT3G22950
    Locus tag
    AT3G22950
    See related
    Araport:AT3G22950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ADP-ribosylation factor C1; ATARFC1
    Summary
    A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins.
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    Genomic context

    See ARFC1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (8136181..8138084, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene G-protein gamma subunit 2 Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Pyruvate kinase family protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001203022.1
    NM_113195.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
     
    located_in plasma membrane HDA PubMed 

    General protein information

    Preferred Names
    ADP-ribosylation factor C1
    NP_001189951.1
    • ADP-ribosylation factor C1 (ARFC1); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1).
    NP_188935.1
    • ADP-ribosylation factor C1 (ARFC1); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1); Has 17774 Blast hits to 17763 proteins in 550 species: Archae - 23; Bacteria - 45; Metazoa - 8202; Fungi - 2537; Plants - 2915; Viruses - 3; Other Eukaryotes - 4049 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8136181..8138084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203022.1NP_001189951.1  ADP-ribosylation factor C1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189951.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHR0, A0A384KMJ2, A0A5S9XEW8, A0A654F9T7, Q9LIK1
      Conserved Domains (1) summary
      cd04153
      Location:3176
      Arl5_Arl8; Arf-like 5 (Arl5) and 8 (Arl8) GTPases
    2. NM_113195.4NP_188935.1  ADP-ribosylation factor C1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188935.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHR0, A0A384KMJ2, A0A5S9XEW8, A0A654F9T7, Q9LIK1
      Conserved Domains (1) summary
      cd04153
      Location:3176
      Arl5_Arl8; Arf-like 5 (Arl5) and 8 (Arl8) GTPases