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    Ribosomal protein L18e/L15 superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837854, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein L18e/L15 superfamily protein
    Primary source
    TAIR:AT1G12960
    Locus tag
    AT1G12960
    See related
    Araport:AT1G12960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13K23.22; F13K23_22
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (4422707..4423155, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nitrate transporter2.5 Neighboring gene root hair specific 2 Neighboring gene plant intracellular ras group-related LRR 3 Neighboring gene Integrase-type DNA-binding superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    part_of cytosolic large ribosomal subunit HDA PubMed 

    General protein information

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    Preferred Names
    Ribosomal protein L18e/L15 superfamily protein
    NP_172756.1
    • Ribosomal protein L18e/L15 superfamily protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT1G70600.1); Has 791 Blast hits to 789 proteins in 315 species: Archae - 0; Bacteria - 0; Metazoa - 342; Fungi - 162; Plants - 138; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4422707..4423155 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101167.1 → NP_172756.1  Ribosomal protein L18e/L15 superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172756.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LPV3
      UniProtKB/TrEMBL
      A0A5S9U5W5
      Conserved Domains (1) summary
      cl12022
      Location:1 → 100
      Ribosomal_L27A; Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LPV3.1

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