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    CID7 CTC-interacting domain 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817168, updated on 18-Sep-2024

    Summary

    Official Symbol
    CID7
    Official Full Name
    CTC-interacting domain 7
    Primary source
    TAIR:AT2G26280
    Locus tag
    AT2G26280
    See related
    Araport:AT2G26280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CTC-interacting domain 7; T1D16.8; T1D16_8
    Summary
    smr (Small MutS Related) domain-containing protein mRNA, complete cds
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    Genomic context

    See CID7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (11187726..11191424, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 10 Neighboring gene 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 Neighboring gene BRCT domain DNA repair protein Neighboring gene root-specific kinase 1 Neighboring gene G protein alpha subunit 1

    Interactions

    General gene information

    NM_001336049.1
    NM_001336050.1
    NM_001336051.1
    NM_001336052.1
    NM_001336053.1
    NM_001336054.1
    NM_128185.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast  
    located_in nucleus  

    General protein information

    Preferred Names
    CTC-interacting domain 7
    NP_180196.1
    • CID7; FUNCTIONS IN: damaged DNA binding, protein binding, ATP binding; INVOLVED IN: mismatch repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Region of unknown function DUF1771 (InterPro:IPR013899); BEST Arabidopsis thaliana protein match is: PRLI-interacting factor, putative (TAIR:AT5G58720.1); Has 309 Blast hits to 309 proteins in 103 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 126; Plants - 79; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11187726..11191424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128185.3 → NP_180196.1  CTC-interacting domain 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180196.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64843, Q0WQS0
      UniProtKB/TrEMBL
      A0A7G2EF34
      Conserved Domains (3) summary
      smart00463
      Location:482 → 567
      SMR; Small MutS-related domain
      cd14371
      Location:219 → 260
      CUE_CID7_like; CUE domain found in CTC-interacting domain proteins CID5, CID6, CID7 and similar proteins
      pfam08590
      Location:410 → 469
      DUF1771; Domain of unknown function (DUF1771)
    2. NM_001336050.1 → NP_001324896.1  CTC-interacting domain 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64843, Q0WQS0
      UniProtKB/TrEMBL
      A0A7G2EF34
    3. NM_001336049.1 → NP_001324897.1  CTC-interacting domain 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNY5, A0A1P8B1H7
    4. NM_001336051.1 → NP_001324893.1  CTC-interacting domain 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNY5, A0A1P8B1N0
    5. NM_001336052.1 → NP_001324892.1  CTC-interacting domain 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNY5, A0A1P8B1H7
    6. NM_001336054.1 → NP_001324894.1  CTC-interacting domain 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNY5, A0A1P8B1J3
    7. NM_001336053.1 → NP_001324895.1  CTC-interacting domain 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNY5, A0A1P8B1N0
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