U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    calcium uniporter-like protein (DUF607) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837484, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    calcium uniporter-like protein (DUF607)
    Primary source
    TAIR:AT1G09575
    Locus tag
    AT1G09575
    See related
    Araport:AT1G09575
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (3101149..3103677, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene germin-like protein 5 Neighboring gene phytochrome A Neighboring gene emp24/gp25L/p24 family/GOLD family protein Neighboring gene Translation protein SH3-like family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Physiological Characterization of a Plant Mitochondrial Calcium Uniporter in Vitro and in Vivo. Teardo E, et al. Plant Physiol, 2017 Feb. PMID 28031475, Free PMC Article
    2. MCU proteins dominate in vivo mitochondrial Ca2+ uptake in Arabidopsis roots. Ruberti C, et al. Plant Cell, 2022 Oct 27. PMID 35938694, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AT1G09575 (MCU1) localizes to the mitochondria in Arabidopsis cells and is highly expressed in the root.
      Title: Physiological Characterization of a Plant Mitochondrial Calcium Uniporter in Vitro and in Vivo.
    Submit: New GeneRIF Correction

    General gene information

    Go to the top of the page Help

    Homology

    NM_001331844.1
    NM_100829.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium channel activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium import into the mitochondrion IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in mitochondrial calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    calcium uniporter-like protein (DUF607)
    NP_563846.1
    • Protein of unknown function (DUF607); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT1G57610.2); Has 384 Blast hits to 384 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 56; Plants - 127; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3101149..3103677 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100829.2 → NP_563846.1  calcium uniporter-like protein (DUF607) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563846.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I111, O80539
      UniProtKB/TrEMBL
      A0A178WJK7, A0A5S9TGW9, A0A7G2DU44
      Conserved Domains (1) summary
      pfam04678
      Location:98 → 257
      MCU; Mitochondrial calcium uniporter

    2. NM_001331844.1 → NP_001322910.1  calcium uniporter-like protein (DUF607) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I111, O80539
      UniProtKB/TrEMBL
      A0A178WJK7, A0A5S9TGW9, A0A7G2DU44
      Conserved Domains (1) summary
      pfam04678
      Location:98 → 257
      MCU; Mitochondrial calcium uniporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4I111.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools