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    plant/protein (DUF2358) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838201, updated on 18-Sep-2024

    Summary

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    Official Full Name
    plant/protein (DUF2358)
    Primary source
    TAIR:AT1G16320
    Locus tag
    AT1G16320
    See related
    Araport:AT1G16320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3O9.12; F3O9_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (5580821..5582154)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase of plastid 2 Neighboring gene Cation efflux family protein Neighboring gene cyclin b3;1 Neighboring gene Aldolase superfamily protein Neighboring gene Aldolase-type TIM barrel family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_101498.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    plant/protein (DUF2358)
    NP_173082.1
    • Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G79510.2); Has 274 Blast hits to 274 proteins in 79 species: Archae - 0; Bacteria - 78; Metazoa - 80; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5580821..5582154
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101498.4 → NP_173082.1  plant/protein (DUF2358) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173082.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHZ2, A0A5S9UR59, A0A654EA88, Q9SA31
      Conserved Domains (1) summary
      pfam10184
      Location:87 → 199
      DUF2358; Uncharacterized conserved protein (DUF2358)
    Nucleotide Protein
    Heading Accession and Version

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