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    Enhancer of polycomb-like transcription factor protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844243, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Enhancer of polycomb-like transcription factor protein
    Primary source
    TAIR:AT1G79020
    Locus tag
    AT1G79020
    See related
    Araport:AT1G79020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    YUP8H12R.36; YUP8H12R_36
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (29727044..29730593, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene histone acetyltransferase of the CBP family 1 Neighboring gene Alpha-helical ferredoxin Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene photosystem II subunit R Neighboring gene recA DNA recombination family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NuA4 and H2A.Z control environmental responses and autotrophic growth in Arabidopsis. Bieluszewski T, et al. Nat Commun, 2022 Jan 12. PMID 35022409, Free PMC Article
    2. The Arabidopsis NuA4 histone acetyltransferase complex is required for chlorophyll biosynthesis and photosynthesis. Zhou JX, et al. J Integr Plant Biol, 2022 Apr. PMID 35043580
    3. The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing. Tan LM, et al. EMBO J, 2018 Oct 1. PMID 30104406, Free PMC Article
    4. AtEAF1 is a potential platform protein for Arabidopsis NuA4 acetyltransferase complex. Bieluszewski T, et al. BMC Plant Biol, 2015 Mar 5. PMID 25849764, Free PMC Article
    5. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_106553.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of NuA4 histone acetyltransferase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Enhancer of polycomb-like transcription factor protein
    NP_178023.2
    • Enhancer of polycomb-like transcription factor protein; CONTAINS InterPro DOMAIN/s: Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT1G16690.1); Has 409 Blast hits to 407 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 106; Plants - 67; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29727044..29730593 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106553.5 → NP_178023.2  Enhancer of polycomb-like transcription factor protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178023.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WVQ6, A0A654EQA8, Q8GYQ9
      Conserved Domains (2) summary
      PTZ00014
      Location:219 → 289
      PTZ00014; myosin-A; Provisional
      pfam10513
      Location:27 → 139
      EPL1; Enhancer of polycomb-like
    Nucleotide Protein
    Heading Accession and Version

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