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    NB-ARC domain-containing disease resistance protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842271, updated on 18-Sep-2024

    Summary

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    Official Full Name
    NB-ARC domain-containing disease resistance protein
    Primary source
    TAIR:AT1G59780
    Locus tag
    AT1G59780
    See related
    Araport:AT1G59780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23H11.10; F23H11_10
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (21993220..21999632, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene auxin response factor 1 Neighboring gene RNA helicase, ATP-dependent, SK12/DOB1 protein Neighboring gene pseudo Neighboring gene Cullin family protein Neighboring gene Cullin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
    2. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_104671.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    NB-ARC domain-containing disease resistance protein
    NP_176187.1
    • NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, flower, synergid; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 16454 Blast hits to 15209 proteins in 528 species: Archae - 16; Bacteria - 828; Metazoa - 1085; Fungi - 125; Plants - 14178; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21993220..21999632 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333867.1 → NP_001322497.1  NB-ARC domain-containing disease resistance protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AU71, A0A5S9WQP3

    2. NM_104671.1 → NP_176187.1  NB-ARC domain-containing disease resistance protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176187.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9XIF0
      UniProtKB/TrEMBL
      A0A5S9WQP3, A0A654EJG7
      Conserved Domains (4) summary
      PLN00113
      Location:575 → 703
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      cd14798
      Location:8 → 120
      RX-CC_like; Coiled-coil domain of the potato virux X resistance protein and similar proteins
      sd00033
      Location:575 → 596
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:163 → 410
      NB-ARC; NB-ARC domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9XIF0.1

    Gene LinkOut

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