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    YSL7 YELLOW STRIPE like 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842884, updated on 18-Sep-2024

    Summary

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    Official Symbol
    YSL7
    Official Full Name
    YELLOW STRIPE like 7
    Primary source
    TAIR:AT1G65730
    Locus tag
    AT1G65730
    See related
    Araport:AT1G65730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1E22.10; F1E22_10; YELLOW STRIPE like 7
    Summary
    Arabidopsis thaliana metal-nicotianamine transporter YSL4
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    Genomic context

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    See YSL7 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (24442388..24446291)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix-like protein Neighboring gene uncharacterized protein Neighboring gene ascorbic acid mannose pathway regulator Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_105247.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables oligopeptide transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    YELLOW STRIPE like 7
    NP_176750.1
    • YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24442388..24446291
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105247.4 → NP_176750.1  YELLOW STRIPE like 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176750.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SHY2
      UniProtKB/TrEMBL
      A0A178W6V2, A0A5S9WTH0, A0A7G2E3J0
      Conserved Domains (1) summary
      pfam03169
      Location:43 → 660
      OPT; OPT oligopeptide transporter protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SHY2.1

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