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    ABCI1 non-intrinsic ABC protein 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842633, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCI1
    Official Full Name
    non-intrinsic ABC protein 10
    Primary source
    TAIR:AT1G63270
    Locus tag
    AT1G63270
    See related
    Araport:AT1G63270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATNAP10; ATP-binding cassette I1; F9N12.11; F9N12_11; NAP10; non-intrinsic ABC protein 10
    Summary
    Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.
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    Genomic context

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    See ABCI1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (23469554..23471510, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DEA(D/H)-box RNA helicase family protein Neighboring gene tetraspanin10 Neighboring gene Serine protease inhibitor (SERPIN) family protein Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene Remorin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtCCMA interacts with AtCcmB to form a novel mitochondrial ABC transporter involved in cytochrome c maturation in Arabidopsis. Rayapuram N, et al. J Biol Chem, 2007 Jul 20. PMID 17550895
    2. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_105006.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ABC-type heme transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    non-intrinsic ABC protein 10
    NP_176516.1
    • non-intrinsic ABC protein 10 (NAP10); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, haem export, CcmA (InterPro:IPR005895); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 3 (TAIR:AT1G67940.1); Has 360446 Blast hits to 338127 proteins in 3858 species: Archae - 6408; Bacteria - 294085; Metazoa - 7445; Fungi - 3734; Plants - 4292; Viruses - 13; Other Eukaryotes - 44469 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23469554..23471510 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105006.3 → NP_176516.1  non-intrinsic ABC protein 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176516.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C8T1
      UniProtKB/TrEMBL
      A0A178W7Z5, A0A5S9WRI6
      Conserved Domains (1) summary
      PRK13539
      Location:9 → 215
      PRK13539; cytochrome c biogenesis protein CcmA; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C8T1.1

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