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    RLP12 receptor like protein 12 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843481, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP12
    Official Full Name
    receptor like protein 12
    Primary source
    TAIR:AT1G71400
    Locus tag
    AT1G71400
    See related
    Araport:AT1G71400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP12; F3I17.30; F3I17_30; receptor like protein 12
    Summary
    Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter.
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    Genomic context

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    See RLP12 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (26909792..26912597)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene receptor like protein 11 Neighboring gene ARM repeat superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional analyses of the CLAVATA2-like proteins and their domains that contribute to CLAVATA2 specificity. Wang G, et al. Plant Physiol, 2010 Jan. PMID 19897604, Free PMC Article
    2. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105809.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in meristem maintenance IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 12
    NP_177296.2
    • receptor like protein 12 (RLP12); INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 11 (TAIR:AT1G71390.1); Has 137756 Blast hits to 35291 proteins in 1265 species: Archae - 48; Bacteria - 8234; Metazoa - 34067; Fungi - 1669; Plants - 82756; Viruses - 14; Other Eukaryotes - 10968 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26909792..26912597
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105809.4 → NP_177296.2  receptor like protein 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177296.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9H7
      UniProtKB/TrEMBL
      A0A178WC97
      Conserved Domains (5) summary
      cd00116
      Location:374 → 601
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:136 → 159
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:36 → 80
      LRRNT_2; Leucine rich repeat N-terminal domain
      pfam12799
      Location:682 → 719
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:351 → 411
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9H7.2

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