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    RmlC-like cupins superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817825, updated on 18-Sep-2024

    Summary

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    Official Full Name
    RmlC-like cupins superfamily protein
    Primary source
    TAIR:AT2G32650
    Locus tag
    AT2G32650
    See related
    Araport:AT2G32650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24L7.21; F24L7_21
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (13850989..13852080)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene cellulose synthase-like B Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene Lycopene beta/epsilon cyclase protein Neighboring gene ncRNA Neighboring gene B3 domain protein, putative (DUF313) Neighboring gene receptor like protein 22 Neighboring gene ncRNA Neighboring gene vesicle-associated membrane protein 725 Neighboring gene receptor like protein 23

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_128824.3
    NM_201855.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RmlC-like cupins superfamily protein
    NP_565748.1
    • RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 18 (TAIR:AT2G32180.1); Has 271 Blast hits to 271 proteins in 67 species: Archae - 0; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
    NP_973584.1
    • RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 18 (TAIR:AT2G32180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13850989..13852080
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128824.3 → NP_565748.1  RmlC-like cupins superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565748.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXW6, O48852
      Conserved Domains (1) summary
      pfam05899
      Location:57 → 131
      Cupin_3; Protein of unknown function (DUF861)

    2. NM_201855.2 → NP_973584.1  RmlC-like cupins superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973584.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXW6, O48852
      Conserved Domains (1) summary
      pfam05899
      Location:57 → 131
      Cupin_3; Protein of unknown function (DUF861)
    Nucleotide Protein
    Heading Accession and Version

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