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    Cyclopropane-fatty-acyl-phospholipid synthase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821928, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cyclopropane-fatty-acyl-phospholipid synthase
    Primary source
    TAIR:AT3G23470
    Locus tag
    AT3G23470
    See related
    Araport:AT3G23470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    16
    Sequence:
    Chromosome: 3; NC_003074.8 (8414616..8418784)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Cyclopropane-fatty-acyl-phospholipid synthase Neighboring gene cyanase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_113250.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in lipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within methylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Cyclopropane-fatty-acyl-phospholipid synthase
    NP_188989.2
    • Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23480.1); Has 719 Blast hits to 717 proteins in 247 species: Archae - 7; Bacteria - 630; Metazoa - 1; Fungi - 36; Plants - 32; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8414616..8418784
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338640.1 → NP_001325982.1  Cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMW4, A0A654FA58

    2. NM_001338641.1 → NP_001325983.1  Cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LMW4, A0A654FA58

    3. NM_113250.3 → NP_188989.2  Cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188989.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V6S8, Q5PP30
      Conserved Domains (2) summary
      COG2230
      Location:152 → 438
      Cfa; Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism]
      pfam12847
      Location:224 → 325
      Methyltransf_18; Methyltransferase domain
    Nucleotide Protein
    Heading Accession and Version

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