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    E3 ubiquitin-protein ligase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839728, updated on 18-Sep-2024

    Summary

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    Official Full Name
    E3 ubiquitin-protein ligase
    Primary source
    TAIR:AT1G28327
    Locus tag
    AT1G28327
    See related
    Araport:AT1G28327
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3H9.2; F3H9_2
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (9931934..9933451)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene protease-like protein Neighboring gene pseudo Neighboring gene dormancy-associated protein-like 1 Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_102598.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase
    NP_174154.2
    • unknown protein; Has 52 Blast hits to 52 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9931934..9933451
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102598.2 → NP_174154.2  E3 ubiquitin-protein ligase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174154.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5U5, F4HWK6, Q5Q0F4
    Nucleotide Protein
    Heading Accession and Version

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