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    filament-like protein (DUF869) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841207, updated on 18-Sep-2024

    Summary

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    Official Full Name
    filament-like protein (DUF869)
    Primary source
    TAIR:AT1G47900
    Locus tag
    AT1G47900
    See related
    Araport:AT1G47900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6B12.1; T6B12_1
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (17647144..17651791, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ribonuclease inhibitor Neighboring gene receptor like protein 7 Neighboring gene pseudo Neighboring gene F-box family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001198238.1
    NM_001333287.1
    NM_103688.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    filament-like protein (DUF869)
    NP_001185167.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2).
    NP_175226.1
    • Plant protein of unknown function (DUF869); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 79140 Blast hits to 41205 proteins in 2472 species: Archae - 1127; Bacteria - 12072; Metazoa - 37984; Fungi - 6739; Plants - 4292; Viruses - 211; Other Eukaryotes - 16715 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17647144..17651791 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103688.4 → NP_175226.1  filament-like protein (DUF869) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175226.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C698
      UniProtKB/TrEMBL
      A0A178WE42
      Conserved Domains (3) summary
      pfam05911
      Location:132 → 957
      FPP; Filament-like plant protein, long coiled-coil
      pfam15898
      Location:797 → 879
      PRKG1_interact; cGMP-dependent protein kinase interacting domain
      cl09111
      Location:57 → 200
      Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...

    2. NM_001198238.1 → NP_001185167.1  filament-like protein (DUF869) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185167.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WE42, F4HV50
      Conserved Domains (3) summary
      pfam05911
      Location:132 → 955
      FPP; Filament-like plant protein, long coiled-coil
      pfam15898
      Location:797 → 879
      PRKG1_interact; cGMP-dependent protein kinase interacting domain
      cl09111
      Location:57 → 200
      Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...

    3. NM_001333287.1 → NP_001322347.1  filament-like protein (DUF869) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C698
      UniProtKB/TrEMBL
      A0A178WE42
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C698.1

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