U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tmem212 transmembrane protein 212 [ Mus musculus (house mouse) ]

    Gene ID: 208613, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tmem212provided by MGI
    Official Full Name
    transmembrane protein 212provided by MGI
    Primary source
    MGI:MGI:2685410
    See related
    Ensembl:ENSMUSG00000043164 AllianceGenome:MGI:2685410
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm564; E030011K20Rik
    Summary
    Predicted to be located in membrane. Is expressed in lung epithelium and nasal cavity respiratory epithelium. Orthologous to human TMEM212 (transmembrane protein 212). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in lung adult (RPKM 27.9), ovary adult (RPKM 26.2) and 1 other tissue See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tmem212 in Genome Data Viewer
    Location:
    3 A3; 3 11.05 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (27920214..27950540, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (27866065..27896391, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain containing 3B Neighboring gene microRNA 3092 Neighboring gene STARR-seq mESC enhancer starr_07240 Neighboring gene STARR-seq mESC enhancer starr_07245 Neighboring gene STARR-seq mESC enhancer starr_07248 Neighboring gene predicted gene, 42194 Neighboring gene predicted gene, 32795 Neighboring gene STARR-seq mESC enhancer starr_07250 Neighboring gene STARR-seq mESC enhancer starr_07251 Neighboring gene predicted gene, 26040 Neighboring gene predicted gene, 42195 Neighboring gene predicted gene, 57707

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164437.1NP_001157909.1  transmembrane protein 212

      See identical proteins and their annotated locations for NP_001157909.1

      Status: VALIDATED

      Source sequence(s)
      BC119391, BE980542
      Consensus CDS
      CCDS50876.1
      UniProtKB/Swiss-Prot
      Q0VE21, Q8C6V3
      Related
      ENSMUSP00000049832.4, ENSMUST00000058077.4

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      27920214..27950540 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006535431.1XP_006535494.1  transmembrane protein 212 isoform X1

    2. XM_030252517.1XP_030108377.1  transmembrane protein 212 isoform X2