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    tRNA-thr(GGU) m(6)t(6)A37 methyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828916, updated on 18-Sep-2024

    Summary

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    Official Full Name
    tRNA-thr(GGU) m(6)t(6)A37 methyltransferase
    Primary source
    TAIR:AT4G28020
    Locus tag
    AT4G28020
    See related
    Araport:AT4G28020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13J8.130; T13J8_130
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (13933232..13935479, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001341901.1
    NM_001341902.1
    NM_001341903.1
    NM_118940.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    tRNA-thr(GGU) m(6)t(6)A37 methyltransferase
    NP_567793.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0066 (InterPro:IPR001378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13933232..13935479 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118940.5 → NP_567793.1  tRNA-thr(GGU) m(6)t(6)A37 methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567793.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZQ0, A0A7G2F328, Q6NMB4
      Conserved Domains (1) summary
      pfam01980
      Location:106 → 233
      UPF0066; Uncharacterized protein family UPF0066

    2. NM_001341901.1 → NP_001328713.1  tRNA-thr(GGU) m(6)t(6)A37 methyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V1A0, A0A1P8B5H4, A0A384KMQ9

    3. NM_001341902.1 → NP_001328712.1  tRNA-thr(GGU) m(6)t(6)A37 methyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V1A0, A0A1P8B5H4, A0A384KMQ9

    4. NM_001341903.1 → NP_001328711.1  tRNA-thr(GGU) m(6)t(6)A37 methyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B5H2
    Nucleotide Protein
    Heading Accession and Version

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