U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Cyp2d26 cytochrome P450, family 2, subfamily d, polypeptide 26 [ Mus musculus (house mouse) ]

    Gene ID: 76279, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cyp2d26provided by MGI
    Official Full Name
    cytochrome P450, family 2, subfamily d, polypeptide 26provided by MGI
    Primary source
    MGI:MGI:1923529
    See related
    Ensembl:ENSMUSG00000022445 AllianceGenome:MGI:1923529
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1300006E06Rik
    Summary
    Predicted to enable anandamide epoxidase activity; aromatase activity; and heme binding activity. Predicted to be involved in arachidonate metabolic process and xenobiotic metabolic process. Predicted to be located in mitochondrion. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Is expressed in several structures, including genitourinary system; liver; lung; and skeletal muscle. Human ortholog(s) of this gene implicated in several diseases, including autoimmune hepatitis; extrapyramidal and movement disease; head and neck squamous cell carcinoma; leukemia (multiple); and major depressive disorder. Orthologous to human CYP2D6 (cytochrome P450 family 2 subfamily D member 6) and CYP2D7 (cytochrome P450 family 2 subfamily D member 7 (gene/pseudogene)). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in liver adult (RPKM 615.5), liver E18 (RPKM 415.9) and 4 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Cyp2d26 in Genome Data Viewer
    Location:
    15 E1; 15 38.72 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (82674308..82678653, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (82790107..82794452, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 2, subfamily d, polypeptide 40 Neighboring gene cytochrome P450, family 2, subfamily d, member 41, pseudogene Neighboring gene transcription factor 20 Neighboring gene STARR-positive B cell enhancer ABC_E9917 Neighboring gene STARR-seq mESC enhancer starr_39304 Neighboring gene transforming growth factor beta regulated gene 3 Neighboring gene predicted gene, 20324

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in arachidonate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in response to xenobiotic stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in xenobiotic metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    cytochrome P450 2D26
    Names
    CYPIID26
    cytochrome P450, 2d26
    NP_083838.1
    XP_006521587.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029562.2NP_083838.1  cytochrome P450 2D26

      See identical proteins and their annotated locations for NP_083838.1

      Status: PROVISIONAL

      Source sequence(s)
      AK004915
      Consensus CDS
      CCDS37163.1
      UniProtKB/Swiss-Prot
      Q8CIM7, Q9DBJ5
      UniProtKB/TrEMBL
      A0A0R4IZY2
      Related
      ENSMUSP00000006094.5, ENSMUST00000006094.6
      Conserved Domains (1) summary
      pfam00067
      Location:37496
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      82674308..82678653 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006521524.4XP_006521587.1  cytochrome P450 2D26 isoform X1

      Conserved Domains (1) summary
      pfam00067
      Location:37395
      p450; Cytochrome P450