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    CG42449 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31486, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG42449provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0259926
    Locus tag
    Dmel_CG42449
    See related
    AllianceGenome:FB:FBgn0259926
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15778; Dmel\CG42449
    Old locus tag
    Dmel_CG15778
    Orthologs
    all
    NEW
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    Genomic context

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    See CG42449 in Genome Data Viewer
    Location:
    5A12-5A12; 1-12 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (5683240..5684456)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (5577273..5578489)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Trapped in endoderm 1 Neighboring gene antisense RNA:CR44958 Neighboring gene Gustatory receptor 5a Neighboring gene Post-GPI attachment to proteins 1 Neighboring gene antisense RNA:CR45525 Neighboring gene crossveinless

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Female site-specific transposase-induced recombination: a high-efficiency method for fine mapping mutations on the X chromosome in Drosophila. Marcus JM. Genetics, 2003 Feb. PMID 12618398, Free PMC Article
    2. Genomic organization of gypsy chromatin insulators in Drosophila melanogaster. Ramos E, et al. Genetics, 2006 Apr. PMID 16452134, Free PMC Article
    3. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    4. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42449-PA
    CG42449-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      5683240..5684456
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169206.2 → NP_001162677.1  uncharacterized protein Dmel_CG42449, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001162677.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JJH1

    2. NM_132016.3 → NP_572244.1  uncharacterized protein Dmel_CG42449, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572244.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3DMV2
      Related
      FBpp0289458
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B3DMV2 B3DMV2
    E1JJH1 E1JJH1

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