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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_027960.1 RefSeqGene
- Range
-
4505..158029
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001198665.2 → NP_001185594.1 rho guanine nucleotide exchange factor 12 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AF180681, AK304316, AP000758, AP001150, BC063117
- Consensus CDS
-
CCDS55794.1
- UniProtKB/TrEMBL
-
A0A2X0SFF5
- Related
- ENSP00000349056.3, ENST00000356641.7
- Conserved Domains (4) summary
-
- cd08754
Location:330 → 551
- RGS_LARG; Regulator of G protein signaling (RGS) domain found in the leukemia-associated Rho guanine nucleotide exchange factor (RhoGEF) protein (LARG)
- cd00992
Location:52 → 126
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13390
Location:976 → 1113
- PH_LARG; Leukemia-associated Rho guanine nucleotide exchange factor Pleckstrin homology (PH) domain
- pfam00621
Location:772 → 957
- RhoGEF; RhoGEF domain
-
NM_001301084.2 → NP_001288013.1 rho guanine nucleotide exchange factor 12 isoform 3
See identical proteins and their annotated locations for NP_001288013.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate first exon and initiates translation at a downstream AUG compared to variant 1. Thd resulting isoform (3) is shorter at the N-terminus compared to isoform 1.
- Source sequence(s)
-
AF180681, AP000659, AP000758, BX647785
- Consensus CDS
-
CCDS76487.1
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
- Related
- ENSP00000432984.1, ENST00000532993.5
- Conserved Domains (4) summary
-
- cd08754
Location:246 → 467
- RGS_LARG; Regulator of G protein signaling (RGS) domain found in the leukemia-associated Rho guanine nucleotide exchange factor (RhoGEF) protein (LARG)
- cd00992
Location:2 → 42
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13390
Location:892 → 1029
- PH_LARG; Leukemia-associated Rho guanine nucleotide exchange factor Pleckstrin homology (PH) domain
- pfam00621
Location:688 → 873
- RhoGEF; RhoGEF domain
-
NM_015313.3 → NP_056128.1 rho guanine nucleotide exchange factor 12 isoform 1
See identical proteins and their annotated locations for NP_056128.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AF180681, AK304316, AP000758, AP001150, BC063117
- Consensus CDS
-
CCDS41727.1
- UniProtKB/Swiss-Prot
- O15086, Q6P526, Q9NZN5
- UniProtKB/TrEMBL
-
A0A2X0SFF5
- Related
- ENSP00000380942.2, ENST00000397843.7
- Conserved Domains (4) summary
-
- cd08754
Location:349 → 570
- RGS_LARG; Regulator of G protein signaling (RGS) domain found in the leukemia-associated Rho guanine nucleotide exchange factor (RhoGEF) protein (LARG)
- cd00992
Location:71 → 145
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13390
Location:995 → 1132
- PH_LARG; Leukemia-associated Rho guanine nucleotide exchange factor Pleckstrin homology (PH) domain
- pfam00621
Location:791 → 976
- RhoGEF; RhoGEF domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
120336413..120489937
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006718805.4 → XP_006718868.1 rho guanine nucleotide exchange factor 12 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0SFF5
- Conserved Domains (4) summary
-
- cd08754
Location:324 → 545
- RGS_LARG; Regulator of G protein signaling (RGS) domain found in the leukemia-associated Rho guanine nucleotide exchange factor (RhoGEF) protein (LARG)
- cd00992
Location:71 → 145
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13390
Location:970 → 1107
- PH_LARG; Leukemia-associated Rho guanine nucleotide exchange factor Pleckstrin homology (PH) domain
- pfam00621
Location:766 → 951
- RhoGEF; RhoGEF domain
-
XM_047426659.1 → XP_047282615.1 rho guanine nucleotide exchange factor 12 isoform X2
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_047426661.1 → XP_047282617.1 rho guanine nucleotide exchange factor 12 isoform X5
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_047426660.1 → XP_047282616.1 rho guanine nucleotide exchange factor 12 isoform X3
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_017017420.2 → XP_016872909.1 rho guanine nucleotide exchange factor 12 isoform X4
- UniProtKB/TrEMBL
-
A0A2X0SFF5
- Conserved Domains (4) summary
-
- cd08754
Location:290 → 511
- RGS_LARG; Regulator of G protein signaling (RGS) domain found in the leukemia-associated Rho guanine nucleotide exchange factor (RhoGEF) protein (LARG)
- smart00325
Location:732 → 917
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd00992
Location:52 → 126
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13390
Location:936 → 1073
- PH_LARG; Leukemia-associated Rho guanine nucleotide exchange factor Pleckstrin homology (PH) domain
-
XM_047426662.1 → XP_047282618.1 rho guanine nucleotide exchange factor 12 isoform X7
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_047426665.1 → XP_047282621.1 rho guanine nucleotide exchange factor 12 isoform X6
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
-
XM_011542720.3 → XP_011541022.1 rho guanine nucleotide exchange factor 12 isoform X6
See identical proteins and their annotated locations for XP_011541022.1
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
- Conserved Domains (4) summary
-
- cd08754
Location:246 → 467
- RGS_LARG; Regulator of G protein signaling (RGS) domain found in the leukemia-associated Rho guanine nucleotide exchange factor (RhoGEF) protein (LARG)
- cd00992
Location:2 → 42
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13390
Location:892 → 1029
- PH_LARG; Leukemia-associated Rho guanine nucleotide exchange factor Pleckstrin homology (PH) domain
- pfam00621
Location:688 → 873
- RhoGEF; RhoGEF domain
-
XM_047426666.1 → XP_047282622.1 rho guanine nucleotide exchange factor 12 isoform X8
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_047426663.1 → XP_047282619.1 rho guanine nucleotide exchange factor 12 isoform X6
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
-
XM_047426667.1 → XP_047282623.1 rho guanine nucleotide exchange factor 12 isoform X9
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_047426668.1 → XP_047282624.1 rho guanine nucleotide exchange factor 12 isoform X8
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_017017421.2 → XP_016872910.1 rho guanine nucleotide exchange factor 12 isoform X6
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
- Conserved Domains (4) summary
-
- cd08754
Location:246 → 467
- RGS_LARG; Regulator of G protein signaling (RGS) domain found in the leukemia-associated Rho guanine nucleotide exchange factor (RhoGEF) protein (LARG)
- cd00992
Location:2 → 42
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd13390
Location:892 → 1029
- PH_LARG; Leukemia-associated Rho guanine nucleotide exchange factor Pleckstrin homology (PH) domain
- pfam00621
Location:688 → 873
- RhoGEF; RhoGEF domain
-
XM_047426670.1 → XP_047282626.1 rho guanine nucleotide exchange factor 12 isoform X10
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_047426664.1 → XP_047282620.1 rho guanine nucleotide exchange factor 12 isoform X6
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
-
XM_047426669.1 → XP_047282625.1 rho guanine nucleotide exchange factor 12 isoform X8
- UniProtKB/TrEMBL
-
A0A2X0SFF5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
120360067..120513690
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054368208.1 → XP_054224183.1 rho guanine nucleotide exchange factor 12 isoform X6
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
-
XM_054368210.1 → XP_054224185.1 rho guanine nucleotide exchange factor 12 isoform X6
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
-
XM_054368215.1 → XP_054224190.1 rho guanine nucleotide exchange factor 12 isoform X9
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368214.1 → XP_054224189.1 rho guanine nucleotide exchange factor 12 isoform X8
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368216.1 → XP_054224191.1 rho guanine nucleotide exchange factor 12 isoform X8
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368203.1 → XP_054224178.1 rho guanine nucleotide exchange factor 12 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368204.1 → XP_054224179.1 rho guanine nucleotide exchange factor 12 isoform X2
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368207.1 → XP_054224182.1 rho guanine nucleotide exchange factor 12 isoform X5
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368205.1 → XP_054224180.1 rho guanine nucleotide exchange factor 12 isoform X3
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368206.1 → XP_054224181.1 rho guanine nucleotide exchange factor 12 isoform X4
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368209.1 → XP_054224184.1 rho guanine nucleotide exchange factor 12 isoform X7
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368213.1 → XP_054224188.1 rho guanine nucleotide exchange factor 12 isoform X6
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
-
XM_054368212.1 → XP_054224187.1 rho guanine nucleotide exchange factor 12 isoform X6
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
-
XM_054368218.1 → XP_054224193.1 rho guanine nucleotide exchange factor 12 isoform X10
- UniProtKB/TrEMBL
-
A0A2X0SFF5
-
XM_054368211.1 → XP_054224186.1 rho guanine nucleotide exchange factor 12 isoform X6
- UniProtKB/TrEMBL
- A0A2X0SFF5, E9PMR6
-
XM_054368217.1 → XP_054224192.1 rho guanine nucleotide exchange factor 12 isoform X8
- UniProtKB/TrEMBL
-
A0A2X0SFF5