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    Tmem61 transmembrane protein 61 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100909776, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem61provided by RGD
    Official Full Name
    transmembrane protein 61provided by RGD
    Primary source
    RGD:1584102
    See related
    EnsemblRapid:ENSRNOG00000026594 AllianceGenome:RGD:1584102
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human TMEM61 (transmembrane protein 61). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 32.3), Heart (RPKM 15.5) and 7 other tissues See more
    Orthologs
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    Genomic context

    See Tmem61 in Genome Data Viewer
    Location:
    5q34
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (126495615..126505242, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (121266799..121276426, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (126086873..126096131, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 9 Neighboring gene barttin CLCNK type accessory subunit beta Neighboring gene 24-dehydrocholesterol reductase Neighboring gene uncharacterized LOC120102943 Neighboring gene ciliary microtubule associated protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001402111.1NP_001389040.1  transmembrane protein 61

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/TrEMBL
      A6JYN0, F1M1X3
      Related
      ENSRNOP00000032745.5, ENSRNOT00000036793.7

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      126495615..126505242 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)