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    srlf-34 SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 191473, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srlf-34
    Official Full Name
    SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
    Primary source
    WormBase:WBGene00014173
    Locus tag
    CELE_ZK970.7
    See related
    AllianceGenome:WB:WBGene00014173
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in response to gamma radiation. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srlf-34 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003280.10 (10312293..10312943)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Mss4 protein Neighboring gene Receptor-type guanylate cyclase gcy-5 Neighboring gene Activated in Blocked Unfolded protein response Neighboring gene Lipoprotein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene expression profiling of oxidative stress response of C. elegans aging defective AMPK mutants using massively parallel transcriptome sequencing. Shin H, et al. BMC Res Notes, 2011 Feb 8. PMID 21303547, Free PMC Article
    2. Uptake of TiO(2) Nanoparticles into C. elegans Neurons Negatively Affects Axonal Growth and Worm Locomotion Behavior. Hu CC, et al. ACS Appl Mater Interfaces, 2018 Mar 14. PMID 29464946
    3. The DNA damage-inducible C. elegans tankyrase is a nuclear protein closely linked to chromosomes. White C, et al. Mol Cell Biochem, 2009 Apr. PMID 19104912
    4. C. elegans feed yolk to their young in a form of primitive lactation. Kern CC, et al. Nat Commun, 2021 Oct 5. PMID 34611154, Free PMC Article
    5. Anti-fungal innate immunity in C. elegans is enhanced by evolutionary diversification of antimicrobial peptides. Pujol N, et al. PLoS Pathog, 2008 Jul 18. PMID 18636113, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in response to gamma radiation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
    NP_496220.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      10312293..10312943
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063819.4 → NP_496220.1  SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496220.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q23683
      Conserved Domains (1) summary
      pfam02520
      Location:40 → 139
      DUF148; Domain of unknown function DUF148
    Nucleotide Protein
    Heading Accession and Version

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