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    arcp-1 ANK_REP_REGION domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175486, updated on 9-Dec-2024

    Summary

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    Official Symbol
    arcp-1
    Official Full Name
    ANK_REP_REGION domain-containing protein
    Primary source
    WormBase:WBGene00009375
    Locus tag
    CELE_F34D10.6
    See related
    AllianceGenome:WB:WBGene00009375
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in ciliated neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See arcp-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    22
    Sequence:
    Chromosome: III; NC_003281.10 (3747521..3759412, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene C2H2-type domain-containing protein Neighboring gene ncRNA Neighboring gene Transcription factor ovo-like homolog lin-48 Neighboring gene Uncharacterized protein Neighboring gene SAND domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the Doublesex/MAB-3 transcription factor DMD-9 in Caenorhabditis elegans. Godini R, et al. G3 (Bethesda), 2023 Feb 9. PMID 36454093, Free PMC Article
    2. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    ANK_REP_REGION domain-containing protein
    NP_001254879.1
    • Confirmed by transcript evidence
    NP_001254880.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      3747521..3759412 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001267950.2 → NP_001254879.1  ANK_REP_REGION domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254879.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C6KRH4
      Conserved Domains (6) summary
      PHA02875
      Location:895 → 1073
      PHA02875; ankyrin repeat protein; Provisional
      PHA03095
      Location:100 → 291
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:617 → 644
      ANK; ANK repeat [structural motif]
      pfam05186
      Location:1189 → 1224
      Dpy-30; Dpy-30 motif
      pfam12796
      Location:1003 → 1097
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:460 → 503
      Ank_2; Ankyrin repeats (3 copies)

    2. NM_001267951.4 → NP_001254880.2  ANK_REP_REGION domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MQ63
      Conserved Domains (6) summary
      PTZ00322
      Location:528 → 633
      PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
      PHA02875
      Location:363 → 541
      PHA02875; ankyrin repeat protein; Provisional
      PHA03095
      Location:64 → 378
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:85 → 112
      ANK; ANK repeat [structural motif]
      pfam05186
      Location:657 → 692
      Dpy-30; Dpy-30 motif
      pfam12796
      Location:471 → 565
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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