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    skr-16 Skp1-related protein [ Caenorhabditis elegans ]

    Gene ID: 191765, updated on 9-Dec-2024

    Summary

    Official Symbol
    skr-16
    Official Full Name
    Skp1-related protein
    Primary source
    WormBase:WBGene00004822
    Locus tag
    CELE_C42D4.6
    See related
    AllianceGenome:WB:WBGene00004822
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be active in cytoplasm and nucleus. Orthologous to human SKP1 (S-phase kinase associated protein 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See skr-16 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_003282.8 (7168710..7169255)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Protein maph-9 Neighboring gene DNA-directed RNA polymerase subunit Neighboring gene Uncharacterized protein Neighboring gene Seven TM Receptor Neighboring gene pseudo

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables cullin family protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Skp1-related protein
    NP_501128.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      7168710..7169255
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068727.7NP_501128.2  Skp1-related protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501128.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18567
      Conserved Domains (2) summary
      smart00512
      Location:30133
      Skp1; Found in Skp1 protein family
      pfam01466
      Location:106165
      Skp1; Skp1 family, dimerization domain