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    Y105E8A.2 Endoplasmic reticulum lectin 1 [ Caenorhabditis elegans ]

    Gene ID: 173298, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y105E8A.2
    Official Full Name
    Endoplasmic reticulum lectin 1
    Primary source
    WormBase:WBGene00013667
    Locus tag
    CELE_Y105E8A.2
    See related
    AllianceGenome:WB:WBGene00013667
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in retrograde protein transport, ER to cytosol. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum lumen. Orthologous to human ERLEC1 (endoplasmic reticulum lectin 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y105E8A.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (14347549..14358326, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Aminopeptidase Neighboring gene Glutaredoxin domain-containing protein Neighboring gene Proton-coupled zinc antiporter SLC30A5 Neighboring gene pre-microRNA mir-8187 Neighboring gene Enoyl-CoA hydratase, mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in ERAD pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in endoplasmic reticulum unfolded protein response IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in retrograde protein transport, ER to cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in endoplasmic reticulum lumen IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Endoplasmic reticulum lectin 1
    NP_740930.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      14347549..14358326 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_170934.7 → NP_740930.3  Endoplasmic reticulum lectin 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_740930.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NF22
      Conserved Domains (1) summary
      pfam07915
      Location:351 → 427
      PRKCSH; Glucosidase II beta subunit-like protein
    Nucleotide Protein
    Heading Accession and Version

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