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    far-6 Fatty-acid and retinol-binding protein 1 [ Caenorhabditis elegans ]

    Gene ID: 189096, updated on 9-Dec-2024

    Summary

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    Official Symbol
    far-6
    Official Full Name
    Fatty-acid and retinol-binding protein 1
    Primary source
    WormBase:WBGene00001390
    Locus tag
    CELE_W02A2.2
    See related
    AllianceGenome:WB:WBGene00001390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable lipid binding activity. Is expressed in anal depressor muscle; body wall musculature; reproductive system; and in male. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See far-6 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (13328359..13329314)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Delta(12) fatty acid desaturase fat-2;Fatty acid desaturase Neighboring gene Chitin-binding type-2 domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fatty acid- and retinol-binding protein 6 does not control worm fatty acid content in Caenorhabditis elegans but might play a role in Haemonchus contortus parasitism. Wu F, et al. Parasit Vectors, 2023 Jul 10. PMID 37430357, Free PMC Article
    2. The FAR protein family of the nematode Caenorhabditis elegans. Differential lipid binding properties, structural characteristics, and developmental regulation. Garofalo A, et al. J Biol Chem, 2003 Mar 7. PMID 12502713
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Fatty-acid and retinol-binding protein 1
    NP_502561.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      13328359..13329314
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070160.6 → NP_502561.1  Fatty-acid and retinol-binding protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502561.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XUB7
      Conserved Domains (1) summary
      pfam05823
      Location:33 → 175
      Gp-FAR-1; Nematode fatty acid retinoid binding protein (Gp-FAR-1)
    Nucleotide Protein
    Heading Accession and Version

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