U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Y48G1C.8 OTU domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 3564797, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Y48G1C.8
    Official Full Name
    OTU domain-containing protein
    Primary source
    WormBase:WBGene00021681
    Locus tag
    CELE_Y48G1C.8
    See related
    AllianceGenome:WB:WBGene00021681
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Y48G1C.8 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    14
    Sequence:
    Chromosome: I; NC_003279.8 (96459..108223, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Sm domain-containing protein Neighboring gene Protein pid-2 Neighboring gene Chitin-binding type-2 domain-containing protein Neighboring gene Ras-related protein rab-11.1 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    OTU domain-containing protein
    NP_001293167.1
    • Confirmed by transcript evidence
    NP_001293168.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      96459..108223 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001306238.2 → NP_001293167.1  OTU domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293167.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CL97

    2. NM_001306239.4 → NP_001293168.1  OTU domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293168.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CL71
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools