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    Y54G2A.11 TPR_REGION domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177058, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y54G2A.11
    Official Full Name
    TPR_REGION domain-containing protein
    Primary source
    WormBase:WBGene00021876
    Locus tag
    CELE_Y54G2A.11
    See related
    AllianceGenome:WB:WBGene00021876
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y54G2A.11 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    6
    Sequence:
    Chromosome: IV; NC_003282.8 (2765715..2771792, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Serpentine receptor class gamma Neighboring gene Serpentine receptor class gamma Neighboring gene WD_REPEATS_REGION domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    TPR_REGION domain-containing protein
    NP_001023488.1
    • Confirmed by transcript evidence
    NP_001380095.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      2765715..2771792 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001028317.6 → NP_001023488.1  TPR_REGION domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001023488.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95XX8

    2. NM_001392270.1 → NP_001380095.1  TPR_REGION domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86FN8
    Nucleotide Protein
    Heading Accession and Version

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