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    col-34 Cuticle collagen 34 [ Caenorhabditis elegans ]

    Gene ID: 177188, updated on 4-Jan-2025

    Summary

    Official Symbol
    col-34
    Official Full Name
    Cuticle collagen 34
    Primary source
    WormBase:WBGene00000611
    Locus tag
    CELE_F36A4.10
    See related
    AllianceGenome:WB:WBGene00000611
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

    See col-34 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (4243545..4244610, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Transthyretin-like family protein Neighboring gene DNA-directed RNA polymerase II subunit RPB1

    General gene information

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    part_of collagen trimer  
    located_in extracellular region PubMed 

    General protein information

    Preferred Names
    Cuticle collagen 34
    NP_500520.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      4243545..4244610 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068119.6 → NP_500520.1  Cuticle collagen 34 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500520.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34687, Q20087
      Conserved Domains (1) summary
      smart01088
      Location:12 → 64
      Col_cuticle_N; Nematode cuticle collagen N-terminal domain
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