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    ddbt deadbeat [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 5740226, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ddbtprovided by FlyBase
    Official Full Name
    deadbeatprovided by FlyBase
    Primary source
    FLYBASE:FBgn0284444
    Locus tag
    Dmel_CG34264
    See related
    AllianceGenome:FB:FBgn0284444
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG34264; Dmel\CG34264; HDC07730
    Summary
    Involved in telomere capping. Located in chromosome, telomeric region. Is expressed in individualization stage spermatid; late elongation-stage spermatid; mid-late elongation-stage spermatid; and spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See ddbt in Genome Data Viewer
    Location:
    61C1-61C1; 3-0.5 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (317084..317789)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (317084..317789)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene tiny tim 2 Neighboring gene Rho guanine nucleotide exchange factor 3 Neighboring gene four wheel drive Neighboring gene uncharacterized protein Neighboring gene Ada2a-containing complex component 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Deadbeat Paternal Effect of Uncapped Sperm Telomeres on Cell Cycle Progression and Chromosome Behavior in Drosophila melanogaster. Yamaki T, et al. Genetics, 2016 Jun. PMID 27029731, Free PMC Article
    2. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article
    3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    4. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in telomere capping IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome, telomeric region IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    deadbeat
    Names
    CG34264-PB
    CG34264-PC
    CG34264-PD
    ddbt-PB
    ddbt-PC
    ddbt-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      317084..317789
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001144393.2 → NP_001137865.1  deadbeat, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137865.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A2VEN4

    2. NM_001103990.3 → NP_001097460.1  deadbeat, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097460.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6IM23, R9PY71

    3. NM_001144392.1 → NP_001137864.1  deadbeat, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137864.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A2VEN4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A2VEN4 A2VEN4
    R9PY71 R9PY71

    Gene LinkOut

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